SNP Profiles of POUND 10   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
TTCCCCAAAATTTTCCCTAATTTTTTTT
1._GC-05-069-2-20
TTCCCCAAAATTTTCCCTAATTTTTTTT
2._GC-05-069-2-20
TTCCCCAAAATTTTCCCTAATTTTTTTT
3._POUND_10
TTCCCC____CCCTAA_TT__
4._POUND_10
TTCCCC____CCCTAA_TT__
5._POUND_10
TTCCCC____CCCTAA_TT__
6._POUND_10
AACCAA____CCCCGG_TT__
 1516171819202122232425262728
_Input profile
AAAAGGCCGGGGCCCCGGAATTCCGGTT
1._GC-05-069-2-20
AAAAGGCCGGGGCCCCGGAATTCCGGTT
2._GC-05-069-2-20
AAAAGGCCGGGGCCCCGGAATTCCGGTT
3._POUND_10
__GG__GG___AATT_GGTT
4._POUND_10
__GG__GG___AATT_GGTT
5._POUND_10
__GG__GG___AATT_GGTT
6._POUND_10
__GG__GG___TTAA_CGAA
 2930313233343536373839404142
_Input profile
TTTTGGGGCCAAGGGGTTGGCCGGGGGG
1._GC-05-069-2-20
TTTTGGGGCCAAGGGGTTGGCCGGGGGG
2._GC-05-069-2-20
TTTTGGGGCCAAGGGGTTGGCCGGGGGG
3._POUND_10
___GG_AAGG__GG____
4._POUND_10
___GG_AAGG__GG____
5._POUND_10
___GG_AAGG__GG____
6._POUND_10
___GG_GGGG__AA____
 4344454647484950515253545556
_Input profile
TTTTAGAGAACCAAGGAATTTTCCTTGG
1._GC-05-069-2-20
TTTTAGAGAACCAAGGAATTTTCCTTGG
2._GC-05-069-2-20
TTTTAGAGAACCAAGGAATTTTCCTTGG
3._POUND_10
_TT________TTCC__
4._POUND_10
_TT________TTCC__
5._POUND_10
_TT________TTCC__
6._POUND_10
_TT________CCCC__
 5758596061626364656667686970
_Input profile
GGCCTTCCCCGGCCAAGGGGAACTCCAA
1._GC-05-069-2-20
GGCCTTCCCCGGCCAAGGGGAACTCCAA
2._GC-05-069-2-20
GGCCTTCCCCGGCCAAGGGGAACTCCAA
3._POUND_10
GG_TTCCCC_CCAAGGGG___AA
4._POUND_10
GG_TTCCCC_CCAAGGGG___AA
5._POUND_10
GG_TTCCCC_CCAAGGGG___AA
6._POUND_10
CC_TTAAGG_AAGGTTGG___AA
 7172737475767778798081828384
_Input profile
CCCCGGACCCAAACCCCCAACCCTTTCC
1._GC-05-069-2-20
CCCCGGACCCAAACCCCCAACCCTTTCC
2._GC-05-069-2-20
CCCCGGACCCAAACCCCCAACCCTTTCC
3._POUND_10
CC_____ACCC___CTTTCC
4._POUND_10
CC_____ACCC___CTTTCC
5._POUND_10
CC_____ACCC___CTTTCC
6._POUND_10
TT_____CCGG___CCTTCC
 8586878889909192      
_Input profile
CCGGCCCCGGCCAAGGX_XX_XX_XX_XX_XX_X
1._GC-05-069-2-20
CCGGCCCCGGCCAAGGX_XX_XX_XX_XX_XX_X
2._GC-05-069-2-20
CCGGCCCCGGCCAAGGX_XX_XX_XX_XX_XX_X
3._POUND_10
_GG_CCGGCC__X_XX_XX_XX_XX_XX_X
4._POUND_10
_GG_CCGGCC__X_XX_XX_XX_XX_XX_X
5._POUND_10
_GG_CCGGCC__X_XX_XX_XX_XX_XX_X
6._POUND_10
_AA_CCTTTT__X_XX_XX_XX_XX_XX_X

Input profile: POUND_10 GC-05-069-2-20

 
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

1._POUND_10 GC-05-069-2-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

2._POUND_10 GC-05-069-2-20

identical
92 shared markers

Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

3._POUND_10

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5220 3
 Dapeng Zhang, 2016

4._POUND_10

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5220 1 > FP
 Dapeng Zhang, 2016

5._POUND_10

identical
39 shared markers

Mars Center for Cocoa Science, Brazil
Location: 5220 4 > FP
 Dapeng Zhang, 2016

6._POUND_10

43.6 %
39 shared markers

Cocoa Research Institute of Ghana (CRIG), Ghana
Location: P11 1146
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP1075 2TcSNP534 3TcSNP591 4TcSNP42 5TcSNP418
6TcSNP702 7TcSNP1096 8TcSNP1060 9TcSNP1165 10TcSNP429
11TcSNP75 12TcSNP891 13TcSNP122 14TcSNP316 15TcSNP521
16TcSNP860 17TcSNP1062 18TcSNP836 19TcSNP878 20TcSNP929
21TcSNP413 22TcSNP1149 23TcSNP174 24TcSNP32 25TcSNP372
26TcSNP448 27TcSNP872 28TcSNP953 29TcSNP1034 30TcSNP1175
31TcSNP1111 32TcSNP577 33TcSNP90 34TcSNP998 35TcSNP150
36TcSNP28 37TcSNP751 38TcSNP1484 39TcSNP602 40TcSNP561
41TcSNP894 42TcSNP1063 43TcSNP1126 44TcSNP1270 45TcSNP606
46TcSNP329 47TcSNP689 48TcSNP944 49TcSNP1242 50TcSNP1383
51TcSNP547 52TcSNP776 53TcSNP151 54TcSNP1520 55TcSNP799
56TcSNP899 57TcSNP226 58TcSNP1439 59TcSNP1442 60TcSNP193
61TcSNP25 62TcSNP364 63TcSNP144 64TcSNP230 65TcSNP560
66TcSNP723 67TcSNP731 68TcSNP701 69TcSNP1041 70TcSNP645
71TcSNP917 72Tcm003s01336581 73Tcm003s07402719 74Tcm001s00947643 75Tcm006s26664133
76Tcm002s20575712 77TcSNP529 78TcSNP1458 79TcSNP60 80TcSNP430
81TcSNP823 82TcSNP619 83TcSNP994 84TcSNP1144 85TcSNP1156
86TcSNP469 87TcSNP999 88TcSNP242 89TcSNP1253 90TcSNP1414
91TcSNP154 92TcSNP240